Smoothie (Spatial Transcriptomics)
Graphical Overview
caholdener01/Smoothie
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Installation
Graphical Overview
Examples
Tutorials
Guides
API Reference
Smoothie (Spatial Transcriptomics)
caholdener01/Smoothie
Home
Installation
Graphical Overview
Examples
Examples
Single Dataset Pipeline
Multiple Datasets Pipeline
Tutorials
Tutorials
Single Dataset Pipelines
Single Dataset Pipelines
Slide-seq Adult Mouse Cerebellum
Stereo-seq Mouse E16.5 Embryo
Visium-HD Human Ovarian Cancer
Xenium Human Renal Cell Carcinoma
Multi-dataset Pipelines
Multi-dataset Pipelines
Slide-seq Mouse Ovulating Ovaries Timecourse
Stereo-seq Mouse Embryonic Development Timecourse
Guides
Guides
1. Creating AnnData Object
2. Micron-to-Unit Conversion Factors for S.T. Platforms
3. Network Visualization using Cytoscape
API Reference
Graphical Overview
